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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5427938_5428416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5427938 - 5428416

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

TCCTGGTGACCT

Flanking Amino Acid:

WTETATGREQNVEVEGLSYR

Intron Amino Acid Position:

565

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

67.9

0.4

1.1

65.1

45.5

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

39.8

-0.7

2.5

59.75

49.5

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009845

5323903 - 5600180

276278

ENSAPLT00000044019

5323903 - 5571574

247672