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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5439129_5444361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5439129 - 5444361

Intron Length:

5233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

GCATTTTCAAGT

Flanking Amino Acid:

TVFFSREGINRERAVNTSQS

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

32.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

76.4

0.59

69.4

41.7

Minor 5ss

35.9

-1.6

3.5

51.5

45.7

Minor BPS

47.6

-0.1

1.8

60.88

43.1

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278