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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54438364_54439649_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54438364 - 54439649

Intron Length:

1286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCCATTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TAACCTTTTATT

Flanking Amino Acid:

DYMSVIRVWLGEDVKPRDYI

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

68.2

0.41

64.7

40.1

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

56.5

0.29

1.6

71.35

39.8

Associated Gene:

Gene:

GNE

Ensembl Gene ID:

ENSAPLG00000005602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005827

54436339 - 54450781

14443