Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54440451_54441185_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54440451 - 54441185

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGTT

5'SS Class:

major

3'SS Sequence:

TTTTGCTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

ATTTTGTTAACT

Flanking Amino Acid:

LGTRQTGRETGENVLHVRDA

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

79.1

34.5

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

76.8

0.6

0.9

41.4

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

70.5

0.72

89.83

34.4

Associated Gene:

Gene:

GNE

Ensembl Gene ID:

ENSAPLG00000005602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005827

54436339 - 54450781

14443