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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54442584_54443686_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54442584 - 54443686

Intron Length:

1103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGATTTTTATTT

Flanking Amino Acid:

NLRVAIVSMKGEIVKKYTQL

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

81.2

30.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.9

0.85

0.7

81.4

35.9

Minor 5ss

36.4

-1.5

2.8

46.5

41.8

Minor BPS

58.8

0.35

1.5

72.71

38.8

Associated Gene:

Gene:

GNE

Ensembl Gene ID:

ENSAPLG00000005602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005827

54436339 - 54450781

14443