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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54443817_54446647_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54443817 - 54446647

Intron Length:

2831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGGGACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

ATTTCTGGGACT

Flanking Amino Acid:

VQLNCRILGVGISTGGRVNP

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

78.2

0.7

77.9

32.1

Major PPT

60.5

0.24

58.1

42.3

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

50.6

0.1

2.2

77.86

38.7

Associated Gene:

Gene:

GNE

Ensembl Gene ID:

ENSAPLG00000005602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005827

54436339 - 54450781

14443