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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5444519_5475938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5444519 - 5475938

Intron Length:

31420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

GCCTCTCTGACT

Flanking Amino Acid:

ASAQLIIPEPAVLSSSVLPS

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.6

37.4

Major BPS

69.1

0.47

60.7

37.6

Major PPT

0.65

0.7

69.7

31.1

Minor 5ss

38.4

-1.3

3.1

47.7

42.5

Minor BPS

53.8

0.2

1.7

68.25

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278