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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54456963_54460718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54456963 - 54460718

Intron Length:

3756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

GCGTTGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAC

U12 Branch Point Sequence:

TGGGCATTAACA

Flanking Amino Acid:

EKLQKTKASNRAAEEAFVND

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

69.5

0.49

71.3

30.3

Major PPT

73.7

0.53

69.2

41.8

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

60.8

0.34

1.8

69.37

42.6

Associated Gene:

Gene:

CLTA

Ensembl Gene ID:

ENSAPLG00000005540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005726

54456791 - 54469685

12895