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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54459332_54460718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54459332 - 54460718

Intron Length:

1387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

ACTTGCTACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCTAC

U12 Branch Point Sequence:

TACTTGCTACCT

Flanking Amino Acid:

EKLQKTKASNRVADEAFYKQ

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

49.5

-0

1.4

50.2

44.9

Major PPT

63.4

0.3

0.9

55.2

39.9

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

42.8

-0.4

2.4

64.87

45.6

Associated Gene:

Gene:

CLTA

Ensembl Gene ID:

ENSAPLG00000005540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029553

54456791 - 54469685

12895

ENSAPLT00000021198

54456791 - 54469685

12895