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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54461989_54463835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54461989 - 54463835

Intron Length:

1847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

CTTCCCTTAAAG

Flanking Amino Acid:

DGVINGDVYQESNGPTDCYA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.6

36.7

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

74.9

0.56

74.9

27.7

Minor 5ss

36.1

-1.6

3.3

45.9

49.3

Minor BPS

69.2

0.46

1.5

70.4

42.3

Associated Gene:

Gene:

CLTA

Ensembl Gene ID:

ENSAPLG00000005540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005726

54456791 - 54469685

12895

ENSAPLT00000029553

54456791 - 54469685

12895

ENSAPLT00000021198

54456791 - 54469685

12895