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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54500143_54501032_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54500143 - 54501032

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCACCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

TTCTGCTTCACC

Flanking Amino Acid:

CIEQAANDLKAHAAMTKKQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

39.3

Major BPS

0.55

1.1

63.4

44.3

Major PPT

71.1

0.47

0.8

67.3

34.2

Minor 5ss

31.8

-2.1

3.5

46.7

48.6

Minor BPS

0.23

2.2

73.91

43.5

Associated Gene:

Gene:

TRIM14

Ensembl Gene ID:

ENSAPLG00000005302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005474

54495080 - 54504157

9078