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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54513452_54517685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54513452 - 54517685

Intron Length:

4234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTCA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TCTGTTTTTACA

Flanking Amino Acid:

HAKCVDKWLKANRTCPICRA

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.7

34.2

Major BPS

58.9

0.22

49.8

35.1

Major PPT

88.5

0.87

0.7

83.2

31.9

Minor 5ss

36.4

-1.5

3.3

47.9

47.8

Minor BPS

54.2

0.12

1.7

65.78

41.1

Associated Gene:

Gene:

RNF38

Ensembl Gene ID:

ENSAPLG00000005157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005345

54513395 - 54533585

20191