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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54518860_54520991_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54518860 - 54520991

Intron Length:

2132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTGCA

5'SS Class:

major

3'SS Sequence:

TCCTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

ATTTCCTTATTT

Flanking Amino Acid:

VEDGEVENYEALLNLAERLG

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.2

67.1

38.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

86.4

0.82

0.7

84.4

29.2

Minor 5ss

27.9

-2.5

3.1

33.2

41.8

Minor BPS

77.1

0.93

1.5

90.41

33.6

Associated Gene:

Gene:

RNF38

Ensembl Gene ID:

ENSAPLG00000005157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005345

54513395 - 54533585

20191