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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54525344_54526952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54525344 - 54526952

Intron Length:

1609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATTT

Flanking Amino Acid:

VPFQAQQSRSPLQRIENDVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

87.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

37.9

-1.4

2.9

52.2

44.4

Minor BPS

0.58

1.5

81.3

34.9

Associated Gene:

Gene:

RNF38

Ensembl Gene ID:

ENSAPLG00000005157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005345

54513395 - 54533585

20191