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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54697653_54699187_R

Intron Information:

Intron Rank:

140134

Intron Class:

major

Intron Phase:

Intron Coordinates:

54697653 - 54699187

Intron Length:

1535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ATCTTTTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.6

37.4

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

80.6

0.69

0.9

77.1

35.2

Minor 5ss

38.4

-1.3

3.1

47.7

42.5

Minor BPS

0.78

1.1

76.76

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024283

54697342 - 54701253

3912