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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54740158_54756932_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54740158 - 54756932

Intron Length:

16775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATCAT

U12 Branch Point Sequence:

CAATCATGAACT

Flanking Amino Acid:

TSKHDYSLSLKSSQGFMHMK

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

87.3

26.9

Major BPS

68.1

0.45

1.1

69.7

35.6

Major PPT

86.1

0.81

0.8

80.6

31.4

Minor 5ss

40.1

-1.1

2.8

53.2

37.3

Minor BPS

57.1

0.3

1.8

72.78

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012646

54739974 - 54774393

34420