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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5476060_5477690_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5476060 - 5477690

Intron Length:

1631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATTATC

5'SS Class:

strong_major

3'SS Sequence:

CGTATTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTTTCCGTATTT

Flanking Amino Acid:

VIPSDYFQIVGGSNLRILGL

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

79.9

33.1

Major BPS

0.82

0.8

24.9

Major PPT

74.3

0.55

0.9

40.8

Minor 5ss

40.5

-1.1

2.8

51.8

39.1

Minor BPS

61.7

0.45

2.2

87.57

38.6

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278