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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5477846_5527759_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5477846 - 5527759

Intron Length:

49914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCCG

5'SS Class:

major

3'SS Sequence:

CCTCTTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TTCCCCCCACCT

Flanking Amino Acid:

SSGSAELSVMVPPWFLVRPS

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

62.3

43.9

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

83.8

0.76

0.7

79.9

25.5

Minor 5ss

28.7

-2.4

2.7

25.5

36.2

Minor BPS

46.5

-0.1

2.1

70.64

45.7

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278