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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54905940_54909362_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54905940 - 54909362

Intron Length:

3423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCACG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TAATTCTTAATT

Flanking Amino Acid:

ISYKDEDSKQRWFAATQFEP

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

42.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

76.9

0.61

0.8

78.1

29.2

Minor 5ss

45.8

-0.4

2.5

58.1

46.3

Minor BPS

79.3

85.77

33.9

Associated Gene:

Gene:

LNPEP

Ensembl Gene ID:

ENSAPLG00000014098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019492

54901858 - 54937326

35469

ENSAPLT00000014725

54881038 - 54937326

56289