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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54917372_54917871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54917372 - 54917871

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

AAATCTTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAATAGCT

Flanking Amino Acid:

FLINYPLEKLDLVAIPDFQS

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.5

21.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

75.7

0.58

66.3

44.1

Minor 5ss

42.8

-0.8

2.8

59.5

Minor BPS

57.9

0.33

2.1

86.76

38.4

Associated Gene:

Gene:

LNPEP

Ensembl Gene ID:

ENSAPLG00000014098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019492

54901858 - 54937326

35469

ENSAPLT00000014725

54881038 - 54937326

56289