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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54918027_54918360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54918027 - 54918360

Intron Length:

334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTACTA

5'SS Class:

major

3'SS Sequence:

TTGTCTTTCGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

TATTTCAGAAAA

Flanking Amino Acid:

AVIAHELAHQWFGNLVTMEW

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

66.2

39.1

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

80.2

0.68

0.8

31.6

Minor 5ss

41.7

-0.9

3.1

56.9

47.2

Minor BPS

50.6

0.01

1.8

67.97

37.4

Associated Gene:

Gene:

LNPEP

Ensembl Gene ID:

ENSAPLG00000014098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019492

54901858 - 54937326

35469

ENSAPLT00000014725

54881038 - 54937326

56289