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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54918475_54920331_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54918475 - 54920331

Intron Length:

1857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

GTTTGTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TATGTTCTACCT

Flanking Amino Acid:

MEEVFPELHSDEDFLNLIFK

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

79.4

0.66

0.8

73.9

36.8

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

-0.1

68.77

42.5

Associated Gene:

Gene:

LNPEP

Ensembl Gene ID:

ENSAPLG00000014098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014725

54881038 - 54937326

56289

ENSAPLT00000019492

54901858 - 54937326

35469