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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54920464_54923228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54920464 - 54923228

Intron Length:

2765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCACTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTCTCCACT

Flanking Amino Acid:

EMFDTLSYIKGASLLLMLKN

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.7

33.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.1

0.59

0.8

28.5

Minor 5ss

-0.4

2.5

59.7

44.7

Minor BPS

0.52

87.74

37.8

Associated Gene:

Gene:

LNPEP

Ensembl Gene ID:

ENSAPLG00000014098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019492

54901858 - 54937326

35469

ENSAPLT00000014725

54881038 - 54937326

56289