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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54923361_54926532_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54923361 - 54926532

Intron Length:

3172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTCATC

5'SS Class:

major

3'SS Sequence:

TGCTTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATGAT

U12 Branch Point Sequence:

TGCTTTTTTACA

Flanking Amino Acid:

SDDLWDSMNEITNGTLDVKK

Intron Amino Acid Position:

596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

70.7

39.5

Major BPS

72.3

0.55

1.1

63.4

42.8

Major PPT

88.2

0.86

0.7

83.2

Minor 5ss

50.5

0.02

2.4

69.4

41.3

Minor BPS

58.4

0.26

1.6

66.98

39.5

Associated Gene:

Gene:

LNPEP

Ensembl Gene ID:

ENSAPLG00000014098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019492

54901858 - 54937326

35469

ENSAPLT00000014725

54881038 - 54937326

56289