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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54928351_54931084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54928351 - 54931084

Intron Length:

2734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTTTGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

CTGCTACTAACT

Flanking Amino Acid:

VNAYLLDQKSAVIELPEEVE

Intron Amino Acid Position:

679

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.5

30.7

Major BPS

76.8

0.67

0.9

75.9

Major PPT

69.1

0.43

69.1

41.8

Minor 5ss

39.1

-1.2

3.1

51.5

45.7

Minor BPS

47.5

-0.1

1.9

66.95

43.5

Associated Gene:

Gene:

LNPEP

Ensembl Gene ID:

ENSAPLG00000014098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019492

54901858 - 54937326

35469

ENSAPLT00000014725

54881038 - 54937326

56289