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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54932164_54933253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54932164 - 54933253

Intron Length:

1090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTGCTAATAATT

Flanking Amino Acid:

GEQQLAARVMYRIDNLLGNK

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.9

34.5

Major BPS

0.75

78.6

Major PPT

83.4

0.75

0.6

82.1

22.7

Minor 5ss

44.6

-0.6

2.5

57.8

40.7

Minor BPS

49.1

0.01

1.8

71.27

39.6

Associated Gene:

Gene:

LNPEP

Ensembl Gene ID:

ENSAPLG00000014098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014725

54881038 - 54937326

56289

ENSAPLT00000019492

54901858 - 54937326

35469