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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54935126_54936126_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54935126 - 54936126

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TCACTCATAATT

Flanking Amino Acid:

VKENWEKLTRKFHLGSYTIQ

Intron Amino Acid Position:

954

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

76.2

39.3

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

84.2

0.77

0.8

81.4

34.9

Minor 5ss

38.4

-1.3

3.6

56.8

41.8

Minor BPS

55.7

0.26

1.6

70.84

40.2

Associated Gene:

Gene:

LNPEP

Ensembl Gene ID:

ENSAPLG00000014098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019492

54901858 - 54937326

35469

ENSAPLT00000014725

54881038 - 54937326

56289