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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54963570_54965926_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54963570 - 54965926

Intron Length:

2357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCAGAA

5'SS Class:

major

3'SS Sequence:

TCCCATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TAATCCATAATC

Flanking Amino Acid:

NIGKTMLEFQELMIVFQLLH

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.2

36.2

Major BPS

90.7

1.01

0.7

19.9

Major PPT

81.4

0.71

0.8

75.7

32.3

Minor 5ss

41.4

-1

3.3

55.5

48.7

Minor BPS

67.1

0.52

1.6

73.91

36.3

Associated Gene:

Gene:

LIX1

Ensembl Gene ID:

ENSAPLG00000009297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009686

54962473 - 54980972

18500