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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55205209_55205424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55205209 - 55205424

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTATTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TTAACATGAATC

Flanking Amino Acid:

RDWDHYKQDSRYYSDSKHRK

Intron Amino Acid Position:

1630

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

85.7

0.89

0.8

22.2

Major PPT

82.7

0.73

0.8

81.4

35.9

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

53.2

0.08

1.7

66.75

38.1

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792