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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55205636_55206664_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55205636 - 55206664

Intron Length:

1029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTATTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAA

U12 Branch Point Sequence:

ATTTATTAAACA

Flanking Amino Acid:

NVNTHVIRNPDVERLKETTN

Intron Amino Acid Position:

1560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

75.5

0.63

66.3

40.4

Major PPT

71.4

0.48

67.2

42.2

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

60.4

0.32

1.8

74.53

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792