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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55206723_55207688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55206723 - 55207688

Intron Length:

966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

TTATCAGTAAGT

Flanking Amino Acid:

HAIKKRQESQQHNDQNISSN

Intron Amino Acid Position:

1541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.1

25.8

Major BPS

0.65

1.1

77.4

37.3

Major PPT

82.9

0.74

0.7

81.7

30.3

Minor 5ss

39.6

-1.2

2.8

49.5

46.6

Minor BPS

0.01

2.5

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005371

55204845 - 55239636

34792

ENSAPLT00000010493

55204845 - 55239642

34798