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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55209655_55210961_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55209655 - 55210961

Intron Length:

1307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CTGCGTTTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

EELDQKTFSVCKERMRPVKA

Intron Amino Acid Position:

1449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

71.5

38.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.2

0.63

0.9

71.5

38.3

Minor 5ss

35.6

-1.6

2.9

43.1

37.8

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792