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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55211103_55213981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55211103 - 55213981

Intron Length:

2879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

ATATACTCAAAC

Flanking Amino Acid:

DEDDDDEDNKVNEIKSENKE

Intron Amino Acid Position:

1316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

87.7

26.2

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

78.9

0.65

0.8

77.6

36.1

Minor 5ss

39.6

-1.2

2.9

43.3

Minor BPS

51.8

0.04

1.8

65.11

39.3

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798