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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55211787_55213981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55211787 - 55213981

Intron Length:

2195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATC

5'SS Class:

strong_major

3'SS Sequence:

TTGCATATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTGATGTGACA

Flanking Amino Acid:

DEDDDDEDNKDEIVSVKHLH

Intron Amino Acid Position:

1314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

87.7

26.2

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

76.6

0.6

0.9

70.2

39.7

Minor 5ss

39.6

-1.2

2.9

43.3

Minor BPS

46.7

-0.2

2.2

66.68

40.2

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005371

55204845 - 55239636

34792