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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55214120_55214473_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55214120 - 55214473

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

AATTTGCGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

GCTGTATTAAAG

Flanking Amino Acid:

RKEAQRLAGAGNSKRRKTRT

Intron Amino Acid Position:

1268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

70.4

0.46

1.1

66.6

44.2

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

46.6

-0.3

1.8

49.95

43.8

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005371

55204845 - 55239636

34792

ENSAPLT00000010493

55204845 - 55239642

34798