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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55214597_55215593_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55214597 - 55215593

Intron Length:

997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCAT

5'SS Class:

strong_major

3'SS Sequence:

ATATTTTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TAGTTCATACTA

Flanking Amino Acid:

MDPDLSLTQKILPDDPDKKP

Intron Amino Acid Position:

1227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

79.7

35.4

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

79.6

0.67

0.8

77.9

35.6

Minor 5ss

-0.9

2.9

58.1

46.5

Minor BPS

48.4

-0.1

1.8

60.68

39.8

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792