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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55216648_55217076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55216648 - 55217076

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTGT

5'SS Class:

major

3'SS Sequence:

CATTTATTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AACATTTTAATA

Flanking Amino Acid:

KDNSCGQERAGGRLGKVKGP

Intron Amino Acid Position:

1130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

63.9

42.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.8

0.51

1.1

76.1

36.9

Minor 5ss

36.7

-1.5

3.6

48.2

Minor BPS

57.1

0.22

1.2

58.76

35.1

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792