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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55217208_55217919_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55217208 - 55217919

Intron Length:

712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

SYKKFGGPLERLDAVARDAE

Intron Amino Acid Position:

1086

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

77.4

33.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

93.1

0.97

0.7

88.7

26.7

Minor 5ss

46.8

-0.3

64.4

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792