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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55217962_55219351_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55217962 - 55219351

Intron Length:

1390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTTCTGTTATT

Flanking Amino Acid:

IKGFSDAEIRRFIKSYKKFG

Intron Amino Acid Position:

1072

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

78.1

32.5

Major BPS

81.6

0.78

0.8

24.9

Major PPT

77.8

0.62

0.9

78.3

34.9

Minor 5ss

40.1

-1.1

3.2

57.2

46.9

Minor BPS

55.4

0.25

2.3

83.31

38.3

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792