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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55219513_55219675_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55219513 - 55219675

Intron Length:

163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTCTG

5'SS Class:

major

3'SS Sequence:

TCTGAAATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTATTCTGAAAT

Flanking Amino Acid:

LPRMRNCAKQISFNGSEGRR

Intron Amino Acid Position:

1019

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.2

63.8

47.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

70.4

0.46

59.5

44.9

Minor 5ss

42.3

-0.9

3.1

58.7

45.8

Minor BPS

67.2

0.62

1.5

83.15

37.1

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005371

55204845 - 55239636

34792

ENSAPLT00000010493

55204845 - 55239642

34798