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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55220896_55220983_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55220896 - 55220983

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CAATCTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCATTTTAAAG

Flanking Amino Acid:

EPEGEEQEPQEMDIDEILKR

Intron Amino Acid Position:

928

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.9

0.67

0.9

76.9

36.7

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

0.08

1.5

60.51

41.6

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792