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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55221081_55221350_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55221081 - 55221350

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATTTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTTTCCTGAAAC

Flanking Amino Acid:

TVLHTGSTPSSSTPFNKEEL

Intron Amino Acid Position:

895

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

82.9

29.9

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

0.68

0.9

35.9

Minor 5ss

55.6

0.19

2.5

75.5

40.6

Minor BPS

75.6

0.78

1.5

85.18

32.4

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792