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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55221500_55222046_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55221500 - 55222046

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATTCA

5'SS Class:

major

3'SS Sequence:

ATTTAAAATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

ACTTATTTAAAA

Flanking Amino Acid:

RAHRIGQKKQVNIYRLVTKG

Intron Amino Acid Position:

846

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

71.2

35.2

Major BPS

81.6

0.78

0.8

24.9

Major PPT

0.32

41.9

Minor 5ss

38.8

-1.3

3.1

50.7

45.6

Minor BPS

60.1

0.31

1.6

67.93

38.2

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792