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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55223568_55223968_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55223568 - 55223968

Intron Length:

401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAGC

5'SS Class:

major

3'SS Sequence:

TCAATCTCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTACTTTTAAAC

Flanking Amino Acid:

YLKYRQFPFQRLDGSIKGEL

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

69.9

41.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

72.9

0.52

0.9

70.3

Minor 5ss

39.4

-1.2

2.9

52.8

43.9

Minor BPS

0.39

1.3

69.65

35.1

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005371

55204845 - 55239636

34792

ENSAPLT00000010493

55204845 - 55239642

34798