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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55224122_55225485_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55224122 - 55225485

Intron Length:

1364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTCA

5'SS Class:

major

3'SS Sequence:

CTTCTTTTGATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTTCTTTTGATA

Flanking Amino Acid:

EFYNKQEALQHLIRSSGKLI

Intron Amino Acid Position:

721

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.2

34.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

77.6

0.62

0.9

75.8

32.8

Minor 5ss

37.1

-1.5

3.2

48.4

47.2

Minor BPS

59.9

0.31

1.2

66.37

34.3

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792