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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55227187_55227994_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55227187 - 55227994

Intron Length:

808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTCA

5'SS Class:

strong_major

3'SS Sequence:

CCATTTCTTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

CATTTCTTTAAG

Flanking Amino Acid:

TTYEILLKDKSFLGGLNWAF

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

79.6

29.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

71.4

0.48

75.1

33.4

Minor 5ss

40.6

-1.1

2.7

51.2

45.1

Minor BPS

50.1

-0.1

1.9

57.08

44.4

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792