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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55228085_55228702_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55228085 - 55228702

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

GTTTACTTAATT

Flanking Amino Acid:

YLGDITSRNMIRTHEWMHPQ

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

88.7

25.1

Major BPS

78.2

0.7

77.9

32.1

Major PPT

82.3

0.73

0.8

77.7

Minor 5ss

36.4

-1.5

48.3

41.8

Minor BPS

78.1

0.96

1.4

90.08

33.6

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792