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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55229588_55230681_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55229588 - 55230681

Intron Length:

1094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TTGCTGTTGACA

Flanking Amino Acid:

SKTTPFKDCKVLKQRPRFVA

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.9

30.1

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

72.1

0.5

1.1

68.1

42.3

Minor 5ss

33.9

-1.8

2.8

41.5

45.1

Minor BPS

50.6

0.01

2.1

67.06

39.6

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792