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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55230861_55231098_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55230861 - 55231098

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TACGTTTCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GTATCTCTAATA

Flanking Amino Acid:

KQYQIVERIIAHSNQKSAAG

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.8

32.5

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.9

0.65

0.9

72.5

37.5

Minor 5ss

46.7

-0.3

2.5

57.4

41.8

Minor BPS

60.7

0.33

1.6

69.77

36.3

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792