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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55231200_55232027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55231200 - 55232027

Intron Length:

828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAATATT

5'SS Class:

major

3'SS Sequence:

ATTCCTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

ATTGCTGTAAAT

Flanking Amino Acid:

TLKQQNETKRWLKNASPEDV

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

0.9

30.4

Major BPS

0.75

78.6

Major PPT

80.5

0.69

0.8

74.4

34.3

Minor 5ss

35.7

-1.6

3.1

47.6

42.5

Minor BPS

50.4

0.09

2.2

75.14

41.9

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792